Investigation of relative expression of some genes related to iron-induced toxicity in two varieties of Rice (Oryza sativa)

Document Type : Research Paper

Authors

1 M.Sc., Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.

2 Assistant Professor. Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.

3 M.Sc, Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.

4 Professor, Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran.

Abstract

Iron toxicity lead to increasing of free oxygen radicals, oxidative stresses and sever yield reduction of Rice. One of the plant responses for physiochemical and biochemical regulation to stresses is change of antioxidant enzyme contents. In this study the effect of five treatments of iron (Fe-EDTA) (0, 100, 250, 400 and 500 mg/li-1) on relative expression of glutaredoxin (GRX), thioredoxin (TRX), peroxiredoxin (PRX) and catalase (CAT) genes of IR64 (susceptible) and Pokkali (tolerant) genotypes of Rice in Yoshida hydroponic media by Real time-PCR technique investigated. The results showed that the relative expression level of CAT gene in different levels of iron in Pokkali genotype was higher than IR64 genotype. The relative expression level of PRX in IR64 genotype in all of the levels was similar. The relative expression level of TRX in Pokkali genotype was not significant. The relative expression level of GRX in the most of stress levels in Pokkali genotype was higher than IR64 genotype. Low level iron result in increasing of relative expression level of CAT, GRX and TRX in IR64 genotype. But with increasing level of iron was not significant change in expression of genes. Also in the most of the iron level relative expression of genes in Pokkali was higher than IR64. Probably lose of change in gene expression levels in high level iron and low gene expression in IR64 is one of the reasons of its susceptibility to iron stress.

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Main Subjects


Ahmad P, Prasad MNV (2011) Abiotic stress responses in plants: metabolism, productivity and sustainability. Springer Science & Business Media. London.
Ali B, Rani I, Hayat S, Ahmad A (2007) Effect of 4-Cl-indole-3-acetic acid on the seed germination of Cicer arietinum exposed to cadmium. Journal of Acta Botanica Croatica. 66(1): 57-65.
Aoyama K, Nakaki T (2015) Glutathione in cellular redox homeostasis: association with the excitatory amino acid carrier 1 (EAAC1). Journal of Molecules. 20 (5): 8742-8758.
Arnér ES, Holmgren A (2000) Physiological functions of thioredoxin and thioredoxin reductase. European Journal of Biochemistry. 267 (20): 6102-6109.
Balestrasse KB, Gardey L, Gallego SM, Tomaro ML (2001) Response of antioxidant defence system in soybean nodules and roots subjected to cadmium stress. Journal of Functional Plant Biology. 28 (6): 497-504.
Becana M, Aparicio TP, Sánchez‐Diaz M (1988) Nitrate and hydrogen peroxide metabolism in Medicago sativa nodules and possible effect on leghaemoglobin function. Journal of Physiologia Plantarum. 72(4): 755-761.
Becker M, Asch F (2005) Iron toxicity in rice-conditions and management concepts. Journal of Plant Nutrition and Soil Science. 168 (4): 558-573.
Belin C, Bashandy T, Cela J, Delorme‐Hinoux V, Riondet C, Reichheld JP (2015) A comprehensive study of thiol reduction gene expression under stress conditions in Arabidopsis thaliana. Journal of Plant, Cell & Environment. 38(2): 299-314.
Bhoomika K, Pyngrope S, Dubey RS (2013). Differential responses of antioxidant enzymes to aluminum toxicity in two rice (Oryza sativa L.) cultivars with marked presence and elevated activity of Fe SOD and enhanced activities of Mn SOD and catalase in aluminum tolerant cultivar. Journal of Plant Growth Regulation. 71(3): 235-252.
Chae HZ, Kang SW, Rhee SG (1999) Isoforms of mammalian peroxiredoxin that reduce peroxides in presence of thioredoxin. Journal of Methods in Enzymology. 300: 219-226.
Cho UH, Seo NH (2005) Oxidative stress in Arabidopsis thaliana exposed to cadmium is due to hydrogen peroxide accumulation. Journal of Plant Science. 168 (1): 113-120.
Comba ME, Benavides MP, Tomaro ML (1998) Effect of salt stress on antioxidant defence system in soybean root nodules. Journal of Functional Plant Biology. 25 (6): 665-671.
Connolly EL, Guerinot ML (2002) Iron stress in plants. Journal of Genome Biology. 3(8): 1-4.
Dietz KJ (2008) Redox signal integration: from stimulus to networks and genes. Journal of Physiologia Plantarum. 133(3): 459-468.
Dufey I, Hakizimana P, Draye X, Lutts S, Bertin P (2009) QTL mapping for biomass and physiological parameters linked to resistance mechanisms to ferrous iron toxicity in rice. Journal of Euphytica. 167(2): 143-160.
El-Shabrawi H, Kumar B, Kaul T, Reddy MK, Singla-Pareek SL, Sopory SK (2010) Redox homeostasis, antioxidant defense, and methylglyoxal detoxification as markers for salt tolerance in Pokkali rice. Journal of Protoplasma. 245(1-4): 85-96.
Feierabend J, Engel S (1986) Photoinactivation of catalase in vitro and in leaves. Journal of Archives of Biochemistry and Biophysics. 251(2): 567-576.
Fomenko DE, Gladyshev VN (2002) CxxS: Fold‐independent redox motif revealed by genome‐wide searches for thiol/disulfide oxidoreductase function. Journal of Protein Science. 11(10): 2285-2296.
Foyer CH, Noctor G (2005) Oxidant and antioxidant signalling in plants: a re‐evaluation of the concept of oxidative stress in a physiological context. Journal of Plant, Cell & Environment. 28(8): 1056-1071.
Gao C, Zhang K, Yang G, Wang Y (2012) Expression analysis of four peroxiredoxin genes from Tamarix hispida in response to different abiotic stresses and exogenous abscisic acid (ABA). International Journal of Molecular Sciences. 13(3): 3751-3764.
Gill SS, Tuteja N (2010) Reactive oxygen species and antioxidant machinery in abiotic stress tolerance in crop plants. Journal of Plant Physiology and Biochemistry. 48 (12): 909-930.
Grillet L, Mari S, Schmidt W (2014) Iron in seeds–loading pathways and subcellular localization. Journal of Frontiers in Plant Science. 4: 1-8.
Hasan SA, Hayat S, Ali B, Ahmad A (2008) 28-Homobrassinolide protects chickpea (Cicer arietinum) from cadmium toxicity by stimulating antioxidants. Journal of Environmental Pollution. 151(1): 60-66.
Hertwig B, Streb P, Feierabend J (1992) Light dependence of catalase synthesis and degradation in leaves and the influence of interfering stress conditions. Journal of Plant Physiology. 100 (3): 1547-1553.
Holmgren A (1979) Glutathione-dependent synthesis of deoxyribonucleotides. Purification and characterization of glutaredoxin from Escherichia coli. Journal of Biological Chemistry. 254 (9): 3664-3671.
Holmgren A (1985) Thioredoxin. Journal of Annual review of biochemistry. 54 (1): 237-271.
Hu Y, Wu Q, Sprague SA, Park J, Oh M, Rajashekar CB, Koiwa H, Nakata PA, Cheng N, Hirschi KD, White FF (2015) Tomato expressing Arabidopsis glutaredoxin gene AtGRXS17 confers tolerance to chilling stress via modulating cold responsive components. Journal of Horticulture Research. 2: 1-11
Jing LW, Chen SH, Guo XL, Zhang H, Zhao YX (2006) Overexpression of a Chloroplast‐located Peroxiredoxin Q Gene, SsPrxQ, Increases the Salt and Low‐temperature Tolerance of Arabidopsis. Journal of Integrative Plant Biology. 48(10): 1244-1249.
Khan NA, Samiullah Singh S, Nazar R (2007) Activities of antioxidative enzymes, sulphur assimilation, photosynthetic activity and growth of wheat (Triticum aestivum) cultivars differing in yield potential under cadmium stress. Journal of Agronomy and Crop Science. 193(6): 435-444.
Khelifa S, M’hamdi M, Rejeb H, Belbahri L, Souayeh N (2011) Relation between catalase activity, salt stress and urban environment in citrus aurantium L. Journal of Horticulture and Forestry. 3(6): 186-189.
Kiba A, Nishihara M, Tsukatani N, Nakatsuka T, Kato Y, Yamamura S (2005) A peroxiredoxin Q homolog from gentians is involved in both resistance against fungal disease and oxidative stress. Journal of Plant and Cell Physiology. 46(6): 1007-1015.
Kim IS, Kim YS, Yoon HS (2013) Expression of salt-induced 2-Cys peroxiredoxin from Oryza sativa increases stress tolerance and fermentation capacity in genetically engineered yeast Saccharomyces cerevisiae. Journal of Applied Microbiology and Biotechnology. 97(8): 3519-3533.
Kim YH, Khan AL, Waqas M, Shim JK, Kim DH, Lee KY, Lee IJ (2014) Silicon application to rice root zone influenced the phytohormonal and antioxidant responses under salinity stress. Journal of Plant Growth Regulation. 33(2): 137-149.
Kobayashi M, Kakizono T, Nagai S (1993) Enhanced carotenoid biosynthesis by oxidative stress in acetate-induced cyst cells of a green unicellular alga, Haematococcus pluvialis. Journal of Applied and Environmental Microbiology. 59(3): 867-873.
León AM, Palma JM, Corpas FJ, Gómez M, Romero-Puertas MC, Chatterjee D, Mateos RM, Luis A, Sandalio LM (2002) Antioxidative enzymes in cultivars of pepper plants with different sensitivity to cadmium. Journal of Plant Physiology and Biochemistry. 40(10): 813-820.
Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using Real-time Quantitative PCR and the 2− ΔΔCT method. Journl of Methods. 25(4): 402-408.
Mehraban P, Abdolzadeh A (2011) Effects of iron toxicity on growth four rice varieties highlighted some biochemical aspects in resistant variety. Eectronic Journal Crop Production. 4(3): 103-120.
Meyer Y, Belin C, Delorme-Hinoux V, Reichheld JP, Riondet C (2012) Thioredoxin and glutaredoxin systems in plants molecular mechanisms, crosstalks, and functional significance. Journl of Antioxidants & Redox Signaling. 17 (8): 1124-1160.
Milone MT, Sgherri C, Clijsters H, Navari-Izzo F (2003) Antioxidative responses of wheat treated with realistic concentration of cadmium. Journal of Environmental and Experimental Botany. 50 (3): 265-276.
Mohsenzadeh Golfazani M, Pasandideh arjmandM, Kordrostami M, Samizadeh LahijiH, Hassani kumleh H, Rezadoost MH (2018) The effect of iron stress on the relative expression level of SOD, MDHR and GPX1 genes in tolerant and sensitive genotypes of rice. Journal of Crop Biotechnology. 24:1-13.
Nagamiya K, Motohashi T, Nakao K, Prodhan SH, Hattori E, Hirose S, Ozawa K, Ohkawa Y, Takabe T, Komamine A (2007) Enhancement of salt tolerance in transgenic rice expressing an Escherichia coli catalase gene, katE. Journl of Plant Biotechnology Reports. 1(1): 49-55.
Ning X, Sun Y, Wang C, Zhang W, Sun M, Hu H, Liu J, Yang L (2018) A rice CPYC-type glutaredoxin OsGRX20 in protection against bacterial blight, methyl viologen and salt stresses. Journl of  Frontiers in Plant Science. 9(111): 1-12.
Pasandideh Arjmand M, Samizadeh Lahiji H, Mohsenzadeh Golfazani M (2017) The investigation of some photorespiration genes relative expression in response to drought stress in canola (Brassica napus). Journl of Crop Biotechnology. 17: 31-42.
Ranieri A, Castagna A, Scebba F, Careri M, Zagnoni I, Predieri G, Pagliari M, di Toppi LS (2005) Oxidative stress and phytochelatin characterisation in bread wheat exposed to cadmium excess. Journl of Plant Physiology and Biochemistry. 43 (1). 45-54.
Rouhier N, Jacquot JP (2005) The plant multigenic family of thiol peroxidases. Journl of Free Radical Biology and Medicine. 38(11): 1413-1421.
Saikia T, Baruah KK (2012) Iron toxicity tolerance in rice (Oryza sativa) and its association with anti-oxidative enzyme activity. Journal of Crop Science. 3(3): 90-94.
Sahrawat KL (2004) Iron toxicity in wetland rice and the role of other nutrients. Journal of Plant Nutrition. 27:1471-1504.
Sinha S, Saxena R (2006) Effect of iron on lipid peroxidation, and enzymatic and non-enzymatic antioxidants and bacoside-A content in medicinal plant Bacopa monnieri L. Journal of Chemosphere. 62 (8): 1340-1350.
Stein RJ, Lopes SIG, Fett JP (2014) Iron toxicity in field-cultivated rice: contrasting tolerance mechanisms in distinct cultivars. Journal of Theoretical and Experimental Plant Physiology. 26(2): 135-146.
Thongbai P, Goodman BA (2000) Free radical generation and post anoxic injury in an iron toxic soil. Journal of Plant Physiol. 23:1887-1990.
Tripathi BN, Bhatt I, Dietz KJ (2009) Peroxiredoxins: a less studied component of hydrogen peroxide detoxification in photosynthetic organisms. Journal of Protoplasma. 235 (1-4): 3-15.
Vaidyanathan R, Kuruvilla S, Thomas G (1999) Characterization and expression pattern of an abscisic acid and osmotic stress responsive gene from rice. Journal of Plant Science. 140(1): 21-30.
Wu LB, Shhadi MY, Gregorio G, Matthus E, Becker M, Frei M (2014) Genetic and physiological analysis of tolerance to acute iron toxicity in rice. Journl of Rice. 7(8): 1-12.
Yoshida S, Fomo DA, Cock JH (1976) Laboratory manual for physiological studies of rice. Los Banos (Philipines) International Rice Research Institute.
Yu J, Hu S, Wang J, Wong GKS, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Journl of Science. 296 (5565): 79-92.
Zagorchev L, Seal C, Kranner I, Odjakova M (2013) A central role for thiols in plant tolerance to antibiotic stress. International Journal of Molecular Sciences. 14(4): 7405-7432.
Zarin J, Motesharezadeh B, Ahmadi A (2017) evaluating activity of some antioxidant enzymes under cadmium toxicity in two wheat cultivars. Journal of Soil Management and Sustainable. 6 (4): 21-37.
Zhang F, Zhang H, Wang G, Xu L, Shen Z (2009) Cadmium-induced accumulation of hydrogen peroxide in the leaf apoplast of Phaseolus aureus and Vicia sativa and the roles of different antioxidant enzymes. Journal of Hazardous Materials. 168 (1): 76-84